All pull requests

Pull requests

• refactor(bam): extract tests into separate module and fix type inference

  #524·JaskRendix opened Sep 27, 2026·

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• chore(master): release 2.0.0

  autorelease: pending
  #522·github-actions[bot] opened Aug 17, 2026Bot·

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• chore(deps): update hts-sys to latest version

  #514·dlejeune opened Jul 13, 2026·

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• links to htslib > 1.19

  #509·stela2502 opened Mar 9, 2026·

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  2

• fix(bcf): interpretation of indexed reader initialisation return code

  #507·jeeeesper opened Feb 27, 2026Contributor·

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  2

• feat(bam): add public constructors for IterAlignedBlocks and IterIntrons

  #506·VedantMadane opened Jan 21, 2026·

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  2

• build(deps): bump actions/checkout from 5 to 6

  dependenciesgithub_actions
  #494·dependabot[bot] opened Nov 24, 2025Bot·

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  1

• Add BAQ computation to index reader

  #485·berndbohmeier opened Aug 18, 2025·

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• feat(bcf): Reduce allocations by using CStr8

  #478·killercup opened Jul 11, 2025·

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  6

• feat: Adding from_hashmap for bam Header

  #473·mrvollger opened Apr 29, 2025Contributor·

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  1

• build(deps): update bincode requirement from 1.2 to 2.0

  dependenciesrust
  #468·dependabot[bot] opened Mar 10, 2025Bot·

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  1

• feat: add bam::flag module for easy handling of SAM/BAM flags

  #440·rLannes opened Sep 30, 2024·

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  14

  

• fix: Workaround Non-Threadsafe Use of Rc in bam::record::Record

  #345·jch-13 opened Feb 2, 2022Contributor·

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  2

• VCF/BCF Writer - auto-recognize format and compression based on file extension

  #307·nh13 opened May 18, 2021Contributor·

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  4

• Alignment and reference sequence from CIGAR and MD

  #110·ingolia opened Sep 2, 2018·

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  11