Issues

• CinnabarAnalyzer._leg_estimate fallback to MBAR only supports RelativeHybridTopologyProtocol

  omsf/fluvial#67 · Filter by author ianmkenney opened on Nov 6, 2026

• rename mappers to planners

  omsf/fluvial#66 · Filter by author JenkeScheen opened on Oct 13, 2026
  1

• analyzers: network analyses wishlist

  omsf/fluvial#65 · Filter by author JenkeScheen opened on Oct 13, 2026

• corrector module

  omsf/fluvial#63 · Filter by author JenkeScheen opened on Sep 28, 2026

• on-the-fly parameterization

  omsf/fluvial#62 · Filter by author JenkeScheen opened on Sep 28, 2026

• Design pattern for execution and retrieval of network results

  omsf/fluvial#55 · Filter by author ianmkenney opened on Sep 8, 2026

• scope out audience(s)

  omsf/fluvial#48 · Filter by author JenkeScheen opened on Aug 11, 2026
  

• Refactor Mappers as NetworkPlanners

  omsf/fluvial#43 · Filter by author ianmkenney opened on Jul 30, 2026

• Add MCS objective

  omsf/fluvial#42 · Filter by author ianmkenney opened on Jul 30, 2026

• Partial charge generation as part of the AlchemicalNetwork generation

  omsf/fluvial#41 · Filter by author ianmkenney opened on Jul 30, 2026

• add sanitization step to generators

  omsf/fluvial#38 · Filter by author JenkeScheen opened on Jul 13, 2026

• Add option for OpenFold3Generator inference output format

  omsf/fluvial#36 · Filter by author ianmkenney opened on Jul 10, 2026
  1

  

• Update project name

  omsf/fluvial#35 · Filter by author ianmkenney opened on Jul 10, 2026
  

• Move src/openplaceholder/core/selection/objective.py out of core and into impl

  omsf/fluvial#32 · Filter by author ianmkenney opened on Jul 6, 2026

• pipeline needs resumable all along the track

  omsf/fluvial#30 · Filter by author JenkeScheen opened on Jul 3, 2026
  

• after prep + protonate, need to do a smoketest with openmm

  omsf/fluvial#29 · Filter by author JenkeScheen opened on Jul 3, 2026

• RDKit Volume objectives

  omsf/fluvial#27 · Filter by author ianmkenney opened on Jul 1, 2026
  1

• what do we do if filters find no matching stereo poses for a given input ligand?

  omsf/fluvial#23 · Filter by author JenkeScheen opened on Jun 29, 2026
  3

• need to track ligand residue names through the workflow

  omsf/fluvial#7 · Filter by author JenkeScheen opened on Jun 3, 2026