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Popular repositories Loading

  1. mirikrupkin.github.io mirikrupkin.github.io Public

    Academic portfolio and software hub of Dr. Miri Krupkin | Computational Biologist specializing in structural AI, RNA viruses, and drug-target interactions.

    JavaScript

  2. structural-ai-validation-suite structural-ai-validation-suite Public

    Production-grade structural benchmarking and repository for manual AlphaFold predictions, multi-chain assembly parsing, and biophysical model integrity validation.

  3. foldcheck-pro foldcheck-pro Public

    An automated biophysical validation and alignment suite for AI-generated protein models, featuring RASA classification and Hungarian algorithm chain pairing.

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  4. foldcheck-rna foldcheck-rna Public

    An automated biophysical validation and alignment suite for AI-generated RNA models, featuring stoichiometry-aware monomer isolation, pLDDT confidence parsing, RNA modification-aware mapping, and z…

    Jupyter Notebook

  5. inspectrna inspectrna Public

    Interactive 3D viewer and open repository of isolated viral regulatory RNA structures from the PDB, paired side by side with Boltz-2 predictions and RMSD, US-align and pLDDT metrics.

    HTML