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@fairdataihub

FAIR Data Innovations Hub

We build open source tools to help researchers learn about and implement FAIR Data practices

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Making FAIR data practices more accessible 🌟

The FAIR Data Principles are a set of guidelines designed to make research data more easily reusable by both humans and machines. 🤖

These practices are essential for ensuring the reproducibility of scientific findings, promoting the reuse of data, and enabling AI/ML-driven analysis to accelerate the pace of new discoveries. They also ensure that data generators receive proper credit. Despite efforts from funding agencies, industry, and researchers, FAIR data practices are not yet widely adopted due to their complexity, insufficient support for researchers, and lack of awareness. 🤯

To address these challenges, we develop open-source tools that automate and simplify FAIR data practices for biomedical researchers, providing intuitive user interfaces for easy adoption. 💻

About Us 🧑‍💼

FAIR Data Innovations Hub is a division of the California Medical Innovations Institute (CalMI2), a non profit biomedical research organization located in San Diego, California. We have a multidisciplinary team of enthusiasts about FAIR Data practices and software development. 🤓

Links 🔗

You can find more information about us at the following links:

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  1. FAIRshare FAIRshare Public

    Simplifying the curation and sharing of biomedical research data and software according to applicable FAIR guidelines

    Vue 80 5

  2. SODA-for-SPARC SODA-for-SPARC Public

    Simplifying data curation for researchers funded by the NIH SPARC initiative

    JavaScript 32 11

  3. alt-text-generator alt-text-generator Public

    Generate alt text descriptions for images

    Python 38 2

  4. codefair-app codefair-app Public

    Your coding assistant to make research software reusable without breaking a sweat!

    TypeScript 17 2

  5. poster2json poster2json Public

    Convert scientific posters (PDF/images) to structured JSON metadata using Large Language Models.

    Python 9

  6. posters-science posters-science Public

    A free, open-source platform for sharing and discovering scientific posters with AI-powered metadata extraction.

    Vue 7 1

Repositories

Showing 10 of 116 repositories
  • structured-doc-editor Public

    Edit structured documents (sections, questions, answers) on real pages with a fixed style, automatic number and drag-to-reorder. Imports JSON, exports PDF and JSON. Prototype built for Data Management Plans (DMPs).

    fairdataihub/structured-doc-editor's past year of commit activity
    HTML 3 MIT 0 1 0 Updated Oct 15, 2026
  • posters-science Public

    A free, open-source platform for sharing and discovering scientific posters with AI-powered metadata extraction.

    fairdataihub/posters-science's past year of commit activity
    Vue 7 MIT 1 1 1 Updated Oct 14, 2026
  • conference-aggregator Public

    Aggregates conference and call-for-paper data from multiple sources, normalizes and deduplicates the results, and maintains a structured JSON dataset for use by other applications.

    fairdataihub/conference-aggregator's past year of commit activity
    TypeScript 1 MIT 0 1 0 Updated Oct 13, 2026
  • fairdataihub.org Public

    Website of the FAIR Data Innovations Hub

    fairdataihub/fairdataihub.org's past year of commit activity
    TypeScript 12 MIT 10 1 2 Updated Oct 13, 2026
  • poster2json Public

    Convert scientific posters (PDF/images) to structured JSON metadata using Large Language Models.

    fairdataihub/poster2json's past year of commit activity
    Python 9 MIT 0 1 0 Updated Oct 13, 2026
  • posters-science-extraction-api Public

    Posters-science beta

    fairdataihub/posters-science-extraction-api's past year of commit activity
    Python 4 MIT 0 2 0 Updated Oct 9, 2026
  • poster-json-examples Public

    Manually annotated .json of selected posters for posters.science

    fairdataihub/poster-json-examples's past year of commit activity
    1 0 1 0 Updated Oct 9, 2026
  • dmpbridge Public

    Convert DMPs (PDF) to RDA Common Standard structured JSON metadata with DMPTool extentions using Large Language Models.

    fairdataihub/dmpbridge's past year of commit activity
    Python 4 MIT 1 2 0 Updated Oct 9, 2026
  • bunny-s3-r2-backup Public

    Automate backup of you bunny s3 compatible container to aws/s3 or cloudflare r2

    fairdataihub/bunny-s3-r2-backup's past year of commit activity
    TypeScript 5 MIT 0 1 0 Updated Oct 9, 2026
  • poster-repo-to-json Public

    Extract scientific poster content to machine-actionable JSON using LLMs. Part of the Machine-Actionable Poster Initiative (Beta).

    fairdataihub/poster-repo-to-json's past year of commit activity
    Python 1 MIT 0 1 0 Updated Oct 4, 2026