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@BIDS-Xu-Lab

Clinical NLP Lab

Clinical NLP Lab

Clinical NLP Lab

Led by Dr. Hua Xu at Biomedical Informatics and Data Science, Yale School of Medicine

Homepage: https://clinicalnlp.org/

The lab has been devoted to developing novel natural language processing (NLP) methods, software, and applications for diverse biomedical texts, such as clinical notes, biomedical literature, and social media. These three areas complement each other: new methods lead to software that are used by many researchers, software facilitates clinical applications, and successful applications reveal where there is need for new methods, closing the loop and forming an ecosystem of our research activities in clinical NLP.

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  1. Me-LLaMA Me-LLaMA Public

    A novel medical large language model family with 13/70B parameters, which have SOTA performances on various medical tasks

    Python 167 21

  2. bike bike Public

    Biomedical Knowledge Explorer

    HTML 1

Repositories

Showing 10 of 73 repositories
  • blu-lite Public

    Blu Lite

    BIDS-Xu-Lab/blu-lite's past year of commit activity
    Vue 0 Apache-2.0 0 0 0 Updated Oct 15, 2026
  • BioAbsStruct Public

    Codebase for BioAbsStruct Dataset

    BIDS-Xu-Lab/BioAbsStruct's past year of commit activity
    Python 1 0 0 0 Updated Oct 14, 2026
  • NeckPain Public
    BIDS-Xu-Lab/NeckPain's past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Oct 6, 2026
  • psychiatry-frontier-llm-evaluation Public

    Code and data repository for "Clinician-rated reasoning quality predicts diagnostic correctness in a psychiatric evaluation of large language models".

    BIDS-Xu-Lab/psychiatry-frontier-llm-evaluation's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 2, 2026
  • topicforest Public

    Official Implementation and Demonstration of TopicForest on Biomedical Scientific Reports

    BIDS-Xu-Lab/topicforest's past year of commit activity
    Jupyter Notebook 8 0 0 0 Updated Sep 28, 2026
  • BIDS-Xu-Lab/impact-annual-meeting's past year of commit activity
    Astro 0 0 0 0 Updated Sep 18, 2026
  • impact-cycle-pipeline Public

    A pipeline for getting latest data from the submission portal

    BIDS-Xu-Lab/impact-cycle-pipeline's past year of commit activity
    Go 0 0 0 0 Updated Sep 4, 2026
  • EHRNavigator Public
    BIDS-Xu-Lab/EHRNavigator's past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 16, 2026
  • echo-viz Public
    BIDS-Xu-Lab/echo-viz's past year of commit activity
    Vue 0 0 0 0 Updated Jul 28, 2026
  • b2ai-event Public
    BIDS-Xu-Lab/b2ai-event's past year of commit activity
    Astro 0 0 0 0 Updated Jul 10, 2026

Most used topics

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